BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039D09SP1|AL430699
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1738 1847 0.0
>3x_Contig1738
Length = 21411
Score = 1847 bits (931), Expect = 0.0
Identities = 939/941 (99%), Gaps = 1/941 (0%)
Strand = Plus / Minus
Query: 1 aaactcggtgttccatattgggtcttataatagtagcagtggtagtggcagtagctgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18725 aaactcggtgttccatattgggtcttataatagtagcagtggtagtggcagtagctgaac 18666
Query: 61 cattactataagctttcgatcaaatttttgaggtttgaatcgaacaactcggatcttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18665 cattactataagctttcgatcaaatttttgaggtttgaatcgaacaactcggatcttatt 18606
Query: 121 ggcatgtccaaggagtagaacggatccttcatcacatagtcactgtaaatgcagtagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18605 ggcatgtccaaggagtagaacggatccttcatcacatagtcactgtaaatgcagtagatt 18546
Query: 181 ttacgtaatatgttttcggcgatgctgacacttgtattgttcctgaaattgttcgtgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18545 ttacgtaatatgttttcggcgatgctgacacttgtattgttcctgaaattgttcgtgctt 18486
Query: 241 atcagcacgaatttgatgcccgttaagctttggaataagaacattgagaactcatccgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18485 atcagcacgaatttgatgcccgttaagctttggaataagaacattgagaactcatccgta 18426
Query: 301 atcatgtgtctgagtccactcttattccaattcgtgaacggttcttggaaatagtccggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18425 atcatgtgtctgagtccactcttattccaattcgtgaacggttcttggaaatagtccggt 18366
Query: 361 cccataaaacttcctaattgcaaaggtgccatcttgttctcggtactcacgccaattcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18365 cccataaaacttcctaattgcaaaggtgccatcttgttctcggtactcacgccaattcca 18306
Query: 421 gggatgtaaggtacctgggtctcagttttctgtgaagacttgttactgatttgaacggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18305 gggatgtaaggtacctgggtctcagttttctgtgaagacttgttactgatttgaacggcc 18246
Query: 481 ttcggtgtgagctggctggcgatcgcgaaaacactgtgtaacgttcccgccaggatcaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18245 ttcggtgtgagctggctggcgatcgcgaaaacactgtgtaacgttcccgccaggatcaag 18186
Query: 541 tagtcgttgctgttcattgttccctttggttcgataaaattgtgattgtacaccaaacca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18185 tagtcgttgctgttcattgttccctttggttcgataaaattgtgattgtacaccaaacca 18126
Query: 601 ccggatttgttgatgatcattacagattggattgccattgtctcgttaatatatcgtagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18125 ccggatttgttgatgatcattacagattggattgccattgtctcgttaatatatcgtagt 18066
Query: 661 gtagtgtggtatagttgtgtatgatctttgtcttggtgttatctttgctgtgttctttcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18065 gtagtgtggtatagttgtgtatgatctttgtcttggtgttatctttgctgtgttctttcc 18006
Query: 721 ttctctgtacttcttctattcttgttaccgtttgtttagtgttgatattttgattgcaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18005 ttctctgtacttcttctattcttgttaccgtttgtttagtgttgatattttgattgcaat 17946
Query: 781 tatttaatgattatagaatgaagctgcatcgatgagtgatgagttggaaggttaaagcgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17945 tatttaatgattatagaatgaagctgcatcgatgagtgatgagttggaaggttaaagcgg 17886
Query: 841 ggctataagagttggtaatactgaagaaattcagattaattgatgtgcgagtwa-ccact 899
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 17885 ggctataagagttggtaatactgaagaaattcagattaattgatgtgcgagtaacccact 17826
Query: 900 gcagtgcaatatgacttccgacctcagaaaggttgacatta 940
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 17825 gcagtgcaatatgacttccgacctcagaaaggttgacatta 17785
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6354
Number of Sequences: 1807
Number of extensions: 6354
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)